PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027355412.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SRS

Protein Properties

Length: 196aa MW: 22002.8 Da PI: 8.2256

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027355412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	96.4	5.4e-30	11	72	4	65
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaa 65 ++++C+dCGnqakkdCa++RCRtCCk++gf+C+th++stW+p+++rr+r +q +++++ XP_027355412.1 11 KGSKCHDCGNQAKKDCAYSRCRTCCKNKGFECQTHIRSTWIPVDRRRHRVEQPPDIPKRHKQ 72 6789*********************************************9987766554444 PP
2	DUF702	77.5	3.6e-24	72	132	94	154
DUF702 94 aeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++s ++le ++P+ +ss+a+f+cvrv+s+dd +e+aYqt+v+igGhvf+G+LydqG+e+ XP_027355412.1 72 QSSYSSLEEFKFPAVMSSMALFSCVRVRSMDDTVNEIAYQTSVNIGGHVFSGLLYDQGPEQ 132 45556677778************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MSRTQQEEIV KGSKCHDCGN QAKKDCAYSR CRTCCKNKGF ECQTHIRSTW IPVDRRRHRV 60 EQPPDIPKRH KQSSYSSLEE FKFPAVMSSM ALFSCVRVRS MDDTVNEIAY QTSVNIGGHV 120 FSGLLYDQGP EQSFNARGDM DPLDQQHNLN LSSDGASATM APLSAPATHE LFLPPSHPFP 180 LASFRPGMTY LSHPKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G21400.1	1e-44	SRS family protein