PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027355450.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 232aa MW: 26351.7 Da PI: 10.2684

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027355450.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	83.1	1.8e-26	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k+i+nk rqvtfskRr g++KKAeELSvLCdae+ +i+fs tgkl++y XP_027355450.1 9 KKIDNKAARQVTFSKRRRGLFKKAEELSVLCDAEIGLIVFSATGKLFDYG 58 68*********************************************995 PP
2	K-box	53.2	1.3e-18	83	171	11	99
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + + + +++ akL kei + + +++G+dL+ L+l+ L+qLe+ Lek+l+++ + K++ ++++i++lqkk el+e+nk L++kl XP_027355450.1 83 SPEPQLVDNNNAKLSKEIADRSQVLSQMKGDDLQGLDLNKLRQLEKTLEKGLNRVIEIKEKRIMSEISDLQKKGIELEEKNKHLKQKLV 171 556677889999**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MTRKKIKIKK IDNKAARQVT FSKRRRGLFK KAEELSVLCD AEIGLIVFSA TGKLFDYGSS 60 RYSMKDIITR YYRHSHVINT RPSPEPQLVD NNNAKLSKEI ADRSQVLSQM KGDDLQGLDL 120 NKLRQLEKTL EKGLNRVIEI KEKRIMSEIS DLQKKGIELE EKNKHLKQKL VEMQIEAMLG 180 KAKVPSLVGS NMKMQEGVSL ETMNGIRSCI NDLPLEDGSS DTALKLGLPF FN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	1e-65	MIKC_MADS family protein