PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027355451.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 230aa    MW: 26032.3 Da    PI: 10.2388
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027355451.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.11.8e-26958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    k+i+nk  rqvtfskRr g++KKAeELSvLCdae+ +i+fs tgkl++y 
  XP_027355451.1  9 KKIDNKAARQVTFSKRRRGLFKKAEELSVLCDAEIGLIVFSATGKLFDYG 58
                    68*********************************************995 PP
2K-box53.31.2e-18811691199
           K-box  11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     + + +  +++ akL kei    + + +++G+dL+ L+l+ L+qLe+ Lek+l+++ + K++ ++++i++lqkk  el+e+nk L++kl 
  XP_027355451.1  81 SPEPQLVDNNNAKLSKEIADRSQVLSQMKGDDLQGLDLNKLRQLEKTLEKGLNRVIEIKEKRIMSEISDLQKKGIELEEKNKHLKQKLV 169
                     556677889999**************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MTRKKIKIKK IDNKAARQVT FSKRRRGLFK KAEELSVLCD AEIGLIVFSA TGKLFDYGSS  60
SMKDIITRYY RHSHVINTRP SPEPQLVDNN NAKLSKEIAD RSQVLSQMKG DDLQGLDLNK  120
LRQLEKTLEK GLNRVIEIKE KRIMSEISDL QKKGIELEEK NKHLKQKLVE MQIEAMLGKA  180
KVPSLVGSNM KMQEGVSLET MNGIRSCIND LPLEDGSSDT ALKLGLPFFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-67MIKC_MADS family protein