PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027355694.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 262aa    MW: 29672.4 Da    PI: 8.6961
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027355694.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.88.8e-0984104526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+++++ G Ck Gd+C+FaHg
  XP_027355694.1  84 ACPDYRK-GNCKKGDTCQFAHG 104
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MIPNLHIPQS ENGTLSPFSS NALETHALAE VFDLFSTDQF RMYQFKVREC PRGRSHDWTE  60
CPYAHPAEKA RRRDPRKYHY SGTACPDYRK GNCKKGDTCQ FAHGVFECWL HPSRYRTQLC  120
KDRTGCRRRV CFFAHTTDQL RSLSPEPFVS SPTSVINSSF SESPPASPGN SRYRALPVSV  180
RELVNSMRNV QLEEGASSRC VFGSPRGGFL SLNGWEEEPA MERVESGRDL RAKIYAKLSR  240
ENSIGPFSTP APDIGWVSEL VK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.15e-83C3H family protein