PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027355798.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 247aa    MW: 27922.4 Da    PI: 10.1318
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027355798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.0002829223
                    EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                    +C++C+k+Fs+  ++  H+r+H
  XP_027355798.1  8 VCKICNKCFSSGKSMGGHMRSH 29
                    6*******************99 PP
2zf-C2H213.60.0002189211123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC+ Cgk+F +   L  Hi +H
  XP_027355798.1 189 FKCKRCGKTFQSYQALGGHIANH 211
                     89**********99999999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEKNNSRVCK ICNKCFSSGK SMGGHMRSHL AKLPIPPKPE TENQSLDNSA KSTHCSIQSA  60
SSLTSHPQRK TTQNFRSLKH NFLASLANSN RENESGSYPK NPTRKRSKCH RKFIAATKMK  120
AEPKQVNSSF ESLPVEEAAR SLLMLSKDKW PESKEIKTQK TKETNRMEAK DSKYGRDDSL  180
VQTQSQFRFK CKRCGKTFQS YQALGGHIAN HSKNEKLCQE VHQSGDERSG NNSDILDQNV  240
FECPYCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.15e-21C2H2 family protein