PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027355986.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 457aa MW: 48305.7 Da PI: 9.0328

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027355986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.3e-05	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_027355986.1 61 FVCEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP
2	zf-C2H2	12.3	0.00052	138	159	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C+ C+k + +s+ k H++t+ XP_027355986.1 138 NCERCSKKYAVHSDWKAHMKTC 159 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MTDPPNPSPI THSSPTSLSL LETSPQPLPP SKKKRSLPGM PDPDAQVIAL SPKTLLATNR 60 FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRGSKEIRKK AYVCPEPSCV HHNPSRALGD 120 LTGIKKHFCR KHGEKKWNCE RCSKKYAVHS DWKAHMKTCG TREYRCDCGT LFSRRDSFIT 180 HRAFCDVLAK ESARAHVQAQ VGASSPPTPP LTPSTTVVSP TLSIQSSEIP ENPTKMSPPS 240 SNATCIVNGV TGSTPSTSTC STVFASVLAS STTTATPIQS PSTSSFSNLM SSMAHPECPN 300 SMSSMTEPTS LSLSTPLYLS NNDPPLFTAS PQPALSATAL LQKAAQMGAS NASLLRGLGL 360 AASFSVGKDD SVGTPTIQWN GQVKQENHPV VDNLGLGLPC GNGGVMGPSS SFVGPPMTRD 420 LLGLSIGDGA SRGGLSALLT SFGGNFDSSG EGGGLGQ

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MTDPPNPSPI THSSPTSLSL LETSPQPLPP SKKKRSLPGM PDPDAQVIAL SPKTLLATNR  60
FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRGSKEIRKK AYVCPEPSCV HHNPSRALGD  120
LTGIKKHFCR KHGEKKWNCE RCSKKYAVHS DWKAHMKTCG TREYRCDCGT LFSRRDSFIT  180
HRAFCDVLAK ESARAHVQAQ VGASSPPTPP LTPSTTVVSP TLSIQSSEIP ENPTKMSPPS  240
SNATCIVNGV TGSTPSTSTC STVFASVLAS STTTATPIQS PSTSSFSNLM SSMAHPECPN  300
SMSSMTEPTS LSLSTPLYLS NNDPPLFTAS PQPALSATAL LQKAAQMGAS NASLLRGLGL  360
AASFSVGKDD SVGTPTIQWN GQVKQENHPV VDNLGLGLPC GNGGVMGPSS SFVGPPMTRD  420
LLGLSIGDGA SRGGLSALLT SFGGNFDSSG EGGGLGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	100	KLRQRGSKEIRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-105	C2H2 family protein