PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027356113.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 226aa    MW: 26286 Da    PI: 9.6458
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027356113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.97.4e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien++nrqvt+skRrng++KKA+EL vLCda+v++i+fsstgkl+ey+s
  XP_027356113.1  9 KRIENTTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYIS 59
                    79***********************************************86 PP
2K-box88.21.5e-2971169199
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yq + g +l+++++es+q++l+kLk+ ++nL++e+R+++G++L++ ++++L+ Le++++k+ k +R++K++++++qi++++kk ++ +e +++L 
  XP_027356113.1  71 YQMTLGIDLWSSHYESMQENLKKLKEVNRNLRKEIRQRMGDCLNDVNMEDLRLLEEEMDKAAKVVRERKYKVITNQIDTQRKKFNNEREVHNRLL 165
                     67778889*************************************************************************************99 PP

           K-box  96 kkle 99 
                     + l+
  XP_027356113.1 166 RDLD 169
                     8875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MARGKIQIKR IENTTNRQVT YSKRRNGLFK KANELTVLCD AKVSIIMFSS TGKLHEYISP  60
STSTKQFFDQ YQMTLGIDLW SSHYESMQEN LKKLKEVNRN LRKEIRQRMG DCLNDVNMED  120
LRLLEEEMDK AAKVVRERKY KVITNQIDTQ RKKFNNEREV HNRLLRDLDA RAEDPRYGLI  180
DNGGEYESVM GFSNLGPRMF ALSLQPTHPN AHCGAGSDLT TYPLLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.17e-90MIKC_MADS family protein