PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356148.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WOX

Protein Properties

Length: 227aa MW: 26235.5 Da PI: 9.151

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.7	1.5e-21	89	148	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ XP_027356148.1 89 TRWNPTQEQIGILEMLYKGgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 148 7***************99************************************97 PP
2	Wus_type_Homeobox	118.4	3.1e-38	89	150	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+lyk G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq XP_027356148.1 89 TRWNPTQEQIGILEMLYKGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 150 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MGSMKVHQLT RGFWEHEPFL TLGCKRLRPL APKLPNTDNN TSTTNPSVPF DLKSFIRPES 60 GPRKLVFSDD NKKDPPSPQG QVETHPGGTR WNPTQEQIGI LEMLYKGGMR TPNAQQIEQI 120 TAQLGKYGKI EGKNVFYWFQ NHKARERQKQ KRNSLSFSHS PRTPTIHSVT LETTRGEVVE 180 GDNEEDSPYK KKCRRWVFEC LEEQSRLQGE EEEHRTLELF PLHPEGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	4e-72	WOX family protein