PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356149.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WOX

Protein Properties

Length: 184aa MW: 20935.7 Da PI: 10.9287

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68.3	9.7e-22	86	145	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ XP_027356149.1 86 TRWNPTQEQIGILEMLYKGgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 145 7***************99************************************97 PP
2	Wus_type_Homeobox	119	2e-38	86	147	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+lyk G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq XP_027356149.1 86 TRWNPTQEQIGILEMLYKGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 147 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MKVHQLTRGF WEHEPFLTLG CKRLRPLAPK LPNTDNNTST TNPSVPFDLK SFIRPESGPR 60 KLVFSDDNKK DPPSPQGQVE THPGGTRWNP TQEQIGILEM LYKGGMRTPN AQQIEQITAQ 120 LGKYGKIEGK NVFYWFQNHK ARERQKQKRN SLSFSHSPRT PTIHSVTLET TRLVNFAGGS 180 SRGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	7e-66	WOX family protein