PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027356216.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family bHLH
Protein Properties Length: 242aa    MW: 27615.6 Da    PI: 5.255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027356216.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.92.1e-145396755
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                      Er+RR+++N++++ Lr+++P+ +      K++Ka+i + A+eYI++L+
  XP_027356216.1 53 VSERNRRKKLNERLFALRSVVPNiS------KMDKASIIKDAIEYIQHLH 96
                    57*********************66......*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MENCDEYKHY WETNMFLQTQ EFDSWGLDEA LSGYYDSSSP DGAASSAASK NIVSERNRRK  60
KLNERLFALR SVVPNISKMD KASIIKDAIE YIQHLHEQEK IIQAEIMELE SGMPKKSPSY  120
DFEQEQLPVL LRSKKKKTEQ LYDSASTRNS PIEVLELRVT YMGEKTVVVS LTCSKRTDTM  180
VKLCEVFESL KLKIITANIT SFSGRLLKTV FLEANEEEKD LLQIKIQTAI AALNDPLSPM  240
SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-90bHLH family protein