PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027356260.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 202aa    MW: 22938.6 Da    PI: 8.1974
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027356260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF81.84.4e-26958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien   rqvtf+kRr+g+lKKA+ELSvLCdae+ ++ifs +gklye +
  XP_027356260.1  9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLVIFSAHGKLYELA 58
                    79*********************************************965 PP
2K-box54.35.8e-19861731299
           K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     a+    ++e + Lk+eie+Lq+ +R l   + +++++ eLq Le++Le  + +iRs K+++ll++i+ l+ ke  l+ +nk+L+ k+ 
  XP_027356260.1  86 ADPLDAKEETNVLKQEIETLQKGIRYLFEGGNGTMTIDELQVLEKNLEVWIYHIRSMKMNILLQEIQALRDKEGTLKATNKYLHDKMV 173
                     55566789********************9999****************************************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MARGKVQLKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGLVIFSA HGKLYELATK  60
GTMQGLIERY MKFTGGPQPE AVTTEADPLD AKEETNVLKQ EIETLQKGIR YLFEGGNGTM  120
TIDELQVLEK NLEVWIYHIR SMKMNILLQE IQALRDKEGT LKATNKYLHD KMVENTALTT  180
FTPFATDTSY PLIIQDGAFQ LY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.12e-82MIKC_MADS family protein