PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356271.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 213aa MW: 23997.7 Da PI: 8.1869

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	143.3	7.5e-45	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++C++apyfp +qp+kfanvh++FGasnv+kll++l++++reda++sl+yeAe+r+rdPvyG+vgvi+ lq+ql+ql+ +l XP_027356271.1 7 PCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLY 101 7********************************************************************************************99 PP DUF260 96 llkee 100 +k+e XP_027356271.1 102 CAKSE 106 88876 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MASSNSPCAA CKFLRRKCQP ECAFAPYFPP DQPQKFANVH RIFGASNVTK LLNDLHPHQR 60 EDAVNSLAYE AEMRLRDPVY GCVGVISLLQ HQLRQLQMDL YCAKSELSRY QNLSITTNHS 120 LIASESAATA YHHHQNTTGS GLGRDHHYHH HHHHQFFPRE QYQQQVVRSF DAGNNYDASL 180 LAMNISASLG QLNHLQHQSA AGGGDDRRTA NRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	5e-77	LBD family protein