PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356328.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

DBB

Protein Properties

Length: 272aa MW: 30055.7 Da PI: 7.2887

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.6	1.9e-06	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ ++++++++fC+ ++ lC+ C H+ H+ XP_027356328.1 4 HCDACNKHHASIFCTADEAALCDACDHRVHHAnklaskHQ 43 7***************************964446666676 PP
2	zf-B_box	23.3	1.3e-07	57	95	5	37
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 +C+ ++e ++ fC++++ lC++C +++H+ H XP_027356328.1 57 TCDVCQERRAFVFCQQDRAILCKECDFSIHSAndltknH 95 8*****************************655555556 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MKIHCDACNK HHASIFCTAD EAALCDACDH RVHHANKLAS KHQRFSLTQP SAKHHSTCDV 60 CQERRAFVFC QQDRAILCKE CDFSIHSAND LTKNHNRFLF TGIRLSATCT LYSSTPSTSS 120 SNSKKNLVLD SHPPLMTKAS NSPSTVPTPV TMNTNEEAGF TSSISEYLIN TIPGWKFEDF 180 LDSPSVPFAS SKNGDEMLSL LDGDIDKGNL VSFSAGGIWV PQAPFSIQMD GQNGYRETRE 240 GSNRSRSGDD NFIVPQLSPP IMNASKRPRL LW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-71	DBB family protein