PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356811.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 202aa MW: 22835.2 Da PI: 5.2819

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	68.2	1.8e-21	10	107	1	98
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +C Ck +rr+ ++C++ +yfp +++ +f+n+ lFG sn+l++++++++++r++a++s++ e+ +++d +G +g +l+l++q+++ + +l+ XP_027356811.1 10 PCLICKQHRRRHDHSCIFGQYFPINRTVDFENASMLFGLSNLLRIMQDVDPQDRQHAADSILREGTTWINDIHHGPLGYVLNLRSQIQSCERQLE 104 699****************************************************************************************9998 PP DUF260 96 llk 98 ++ XP_027356811.1 105 NVN 107 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MNDENRGNYP CLICKQHRRR HDHSCIFGQY FPINRTVDFE NASMLFGLSN LLRIMQDVDP 60 QDRQHAADSI LREGTTWIND IHHGPLGYVL NLRSQIQSCE RQLENVNRLL AYCRDQANST 120 VQMGISPFAG SSAFHLPQQN TQLGDSSIQF PNLGGTEFFS SSHEKGESST IASKEKEDVD 180 EEKESMVDDK GKNITSDKDA NV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27650.1	2e-18	LBD family protein