PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356836.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 1101aa MW: 122912 Da PI: 6.1846

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356836.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.6	9.8e-23	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F +++ XP_027356836.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFI--RDE 216 99***************************954.4444.48**********************************************..557 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++l++++ r+ XP_027356836.1 217 KQQLLLGIKRA 227 88889988775 PP
2	Auxin_resp	124.9	5.6e-41	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m+fete+s rr++Gt++g+sdldpvrW+nS+Wr+L+ XP_027356836.1 252 AAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALYNQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQ 334 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1101 aa Download sequence
MKAPPNGYLP NSGEGERKTI NSELWHACAG PLVSLPPAGS LVVYFPQGHS EQVAASMQKE 60 ADFIPSYPNL PSKLICMLHN VALHADPETD EVYAQMTLQP VNKYDKEAIL ASDMGLKQSQ 120 QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDNTWTFRH 180 IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKQQL LLGIKRANRQ QPALSSSVIS 240 SDSMHIGILA AAAHAASNNS PFTIFYNPRA SPSEFVIPLA KYNKALYNQV SLGMRFRMMF 300 ETEESGVRRY MGTITGISDL DPVRWKNSQW RNLQVGWDES TAGERPSRVS IWDIEPVVTP 360 FYICPPPFFR PKFPKQPGMP EDESDIENAF KRAMPWLGDD LGMKDASSSI FPGLSLVQWM 420 SMQQNNQFSA AQSGFIPPSM LSSNTLHGNL NTDDPSKLLN FQAPVLTAQN LQFNKPNLPN 480 QVNQLQQSPT SWPPQQQQQQ QQKLQSLLQT PLNQLQQQQQ QQQAQQPQQP QQQQQQQQQS 540 CQQTIMNNGA VAANQIPNQC VQSPVTYSQF QQQQLLPGSI SPQQSFQSAG KNQLLMTSLP 600 QDSQFQQQID QQASLLQRQQ QQQTQLQQSP LQLLQQSLSQ RAPQQPQMTQ VSQQNTSEQQ 660 PQLQFLQKLQ QQQQQQQQLL STSSSLLQSQ LLEQQNTPQQ NQQLPQLPVS QHQPQQLGNS 720 GFSMEKLLNG NNFASAALMQ TQQFPVNQPH HAQKSLTNTR ALSTLTDGDA PSCSTSPSTN 780 NCQVSTPNLL KRNQQVTATL GGPSVVEPTN NLMQELQSKS EMQIKHEVPS VRGPDQLKYK 840 GTMADQLETS SGTSYCIDPN NIHQNFPLPN FCMDGDVQSH PRNNLPFGSN LDGLTPDTLL 900 SRGYDSQKDL QNLLSNYGSA PRDIETELST AAISSQPFGV PNMPFKPGCS SDIAINDTGV 960 LNNGLWANQT QRMRTYTKVQ KCGSVGRCID VTRYKGYDEL RHDLARMFGI EGQLEDPQRT 1020 EWKLVYVDHE NDILLVGDDP WEEFVSCVQS IKILSSAEVQ QMSLDGDLGH VPIPNQACSG 1080 TDNGNAWRGQ YEDNSAASFN R

Sequence ? help Back to Top

Protein Sequence Length: 1101 aa Download sequence

MKAPPNGYLP NSGEGERKTI NSELWHACAG PLVSLPPAGS LVVYFPQGHS EQVAASMQKE  60
ADFIPSYPNL PSKLICMLHN VALHADPETD EVYAQMTLQP VNKYDKEAIL ASDMGLKQSQ  120
QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDNTWTFRH  180
IYRGQPKRHL LTTGWSVFVS TKRLFAGDSV LFIRDEKQQL LLGIKRANRQ QPALSSSVIS  240
SDSMHIGILA AAAHAASNNS PFTIFYNPRA SPSEFVIPLA KYNKALYNQV SLGMRFRMMF  300
ETEESGVRRY MGTITGISDL DPVRWKNSQW RNLQVGWDES TAGERPSRVS IWDIEPVVTP  360
FYICPPPFFR PKFPKQPGMP EDESDIENAF KRAMPWLGDD LGMKDASSSI FPGLSLVQWM  420
SMQQNNQFSA AQSGFIPPSM LSSNTLHGNL NTDDPSKLLN FQAPVLTAQN LQFNKPNLPN  480
QVNQLQQSPT SWPPQQQQQQ QQKLQSLLQT PLNQLQQQQQ QQQAQQPQQP QQQQQQQQQS  540
CQQTIMNNGA VAANQIPNQC VQSPVTYSQF QQQQLLPGSI SPQQSFQSAG KNQLLMTSLP  600
QDSQFQQQID QQASLLQRQQ QQQTQLQQSP LQLLQQSLSQ RAPQQPQMTQ VSQQNTSEQQ  660
PQLQFLQKLQ QQQQQQQQLL STSSSLLQSQ LLEQQNTPQQ NQQLPQLPVS QHQPQQLGNS  720
GFSMEKLLNG NNFASAALMQ TQQFPVNQPH HAQKSLTNTR ALSTLTDGDA PSCSTSPSTN  780
NCQVSTPNLL KRNQQVTATL GGPSVVEPTN NLMQELQSKS EMQIKHEVPS VRGPDQLKYK  840
GTMADQLETS SGTSYCIDPN NIHQNFPLPN FCMDGDVQSH PRNNLPFGSN LDGLTPDTLL  900
SRGYDSQKDL QNLLSNYGSA PRDIETELST AAISSQPFGV PNMPFKPGCS SDIAINDTGV  960
LNNGLWANQT QRMRTYTKVQ KCGSVGRCID VTRYKGYDEL RHDLARMFGI EGQLEDPQRT  1020
EWKLVYVDHE NDILLVGDDP WEEFVSCVQS IKILSSAEVQ QMSLDGDLGH VPIPNQACSG  1080
TDNGNAWRGQ YEDNSAASFN R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein