PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027356844.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family SRS
Protein Properties Length: 332aa    MW: 35645.6 Da    PI: 7.2343
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027356844.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702169.22.1e-521402916152
          DUF702   6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa....aeaaskrkrelkskkqsalsstklssaes 96 
                       C+dCGn+ak+dC+++RCRtCCk rgfdC+thv+stWvpa+ rr+         ++a+++     ++++   + +++++++++++s +l +++ 
  XP_027356844.1 140 RVCEDCGNRAKRDCSYRRCRTCCKGRGFDCSTHVRSTWVPASLRRSSGGSSDGGDASASKRLralgSSQNVAATSHSSTSNATTTKSCSLDTSSC 234
                     47*******************************************98666655554444444334422222222233344444444444444444 PP

          DUF702  97 kkeletss.lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGl 152
                     ++   +++ lP++v+++avfrc rvs++  ge+e+aY ++v i+GhvfkG+Lyd+G+
  XP_027356844.1 235 HQDAGFKQsLPRHVHAPAVFRCHRVSAIGSGEDEFAYLATVRISGHVFKGFLYDHGV 291
                     444444335***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MFTGAVAMAA ECDMLTMLGL RDLVLIAPTP SQVSLHHHQQ QQQQTQQPIS AEHHANLPLP  60
SSASLSVGLG FFPLLTATPC MPHPHDHTND VQVHNNTTNN YWNLNMCGSE VNSAREGMMV  120
EEDDGRNKHL MEGEESGEFR VCEDCGNRAK RDCSYRRCRT CCKGRGFDCS THVRSTWVPA  180
SLRRSSGGSS DGGDASASKR LRALGSSQNV AATSHSSTSN ATTTKSCSLD TSSCHQDAGF  240
KQSLPRHVHA PAVFRCHRVS AIGSGEDEFA YLATVRISGH VFKGFLYDHG VGGKNEVPNV  300
SELQLGNNGS GKSNRECSAI GVPNSAFPAS AC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.12e-42SRS family protein