PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356931.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 222aa MW: 24769.7 Da PI: 6.5047

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.3	1.1e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+ +v+ +G+g +W + +++ g++R++k+c++rw++yl XP_027356931.1 14 RGPWSPEEDATLKGYVEIHGTGgNWIALPKKAGLRRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	47	5.7e-15	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ + q+G++ W+tIa+ ++ gRt++++k++w++ XP_027356931.1 69 GGFTEEEDHIICTLYSQMGSR-WSTIASQLP-GRTDNNIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDATLKGYVE IHGTGGNWIA LPKKAGLRRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDHIIC TLYSQMGSRW STIASQLPGR TDNNIKNYWN TKLKKKLMAG 120 KVSFKTIADD DTQTQNEETQ ISYFHASQNQ SSTIVSETGA EWSNNSMVSL SQGGSSMSDL 180 SSFAVDNVND CVAEHEGHKA MDLLLDFDYG FPYNIVEAFL LS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	1e-73	MYB family protein