PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356942.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 364aa MW: 40858.7 Da PI: 6.5992

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356942.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.8	1.3e-10	288	328	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq XP_027356942.1 288 RKRRERINERLKILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 328 9****************97.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
METLGAFPDE EWECYGRMFA IENHYDLPQL LGQSSLLLGE DDGNSGMQFC STHEAGGIKS 60 MFYSLDSHNS NFQYLSQEGS HGRNCSDHTL FVANPGHTNY CFDYPDNVLA NTNTSIGFCM 120 MDKKRPGSFV ELHTDVVMKE NVNLNEEEKS DRSKNYDQTQ VKPNVFPTKL SKHKRMLDVP 180 ELVEDKTNSC GNSKKKPCIS KEVQRCMKTA RSMKNQKLDR KGNEAEETNV GSDGYSSSSY 240 ASEEDNTSQE NSVGATSASK SSPTVINLNG KRRASRGTAT DPQSLYARKR RERINERLKI 300 LQNLVPNGTK VDISTMLEEA VHYVKFLQLQ IKLLSSDDLW MYAPIAYNGL DIGLNLSRKI 360 SPPL

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

METLGAFPDE EWECYGRMFA IENHYDLPQL LGQSSLLLGE DDGNSGMQFC STHEAGGIKS  60
MFYSLDSHNS NFQYLSQEGS HGRNCSDHTL FVANPGHTNY CFDYPDNVLA NTNTSIGFCM  120
MDKKRPGSFV ELHTDVVMKE NVNLNEEEKS DRSKNYDQTQ VKPNVFPTKL SKHKRMLDVP  180
ELVEDKTNSC GNSKKKPCIS KEVQRCMKTA RSMKNQKLDR KGNEAEETNV GSDGYSSSSY  240
ASEEDNTSQE NSVGATSASK SSPTVINLNG KRRASRGTAT DPQSLYARKR RERINERLKI  300
LQNLVPNGTK VDISTMLEEA VHYVKFLQLQ IKLLSSDDLW MYAPIAYNGL DIGLNLSRKI  360
SPPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	271	291	KRRASRGTATDPQSLYARKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33880.1	2e-55	bHLH family protein