PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357010.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 347aa MW: 39045.9 Da PI: 6.4265

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357010.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1e-17	202	254	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_027357010.1 202 KLRLSKEQSAFLEESFKEHNTLNPKQKVALAKQLHLRPRQVEVWFQNRRARTK 254 56799**********************************************98 PP
2	HD-ZIP_I/II	128.1	3.6e-41	201	289	2	91
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 kk+rlskeq+++LEesF+e+++L+p++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++d+lkeen+rL+ke +eLr +l XP_027357010.1 201 KKLRLSKEQSAFLEESFKEHNTLNPKQKVALAKQLHLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCDTLKEENKRLQKELQELR-AL 289 9*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MELGLSLGDP SKPLEAPNQL GLGFNTNLSI GPLFTKLKDQ HQEEEEEEEE RAKQKHKHNS 60 QSHSTTEEEH EEATTESLVS PSLKPNTNTI VQLDLLPHTP AAPRINPPST FSFPWDPLWE 120 NAGSGCSMGL DMNWVPMAAT VTAEDEAELS SSPNSAASSF HMDLCIFRRR SVSGECYDQT 180 KRVYCRGSDE DENGGSGSTT KKLRLSKEQS AFLEESFKEH NTLNPKQKVA LAKQLHLRPR 240 QVEVWFQNRR ARTKLKQTEV DCEYLKRCCD TLKEENKRLQ KELQELRALK TNSNPFYMQL 300 PATTLTMCPS CERVAPNSTS NTTPSVSLTA KAIQFPIGDN KPWKKLI

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MELGLSLGDP SKPLEAPNQL GLGFNTNLSI GPLFTKLKDQ HQEEEEEEEE RAKQKHKHNS  60
QSHSTTEEEH EEATTESLVS PSLKPNTNTI VQLDLLPHTP AAPRINPPST FSFPWDPLWE  120
NAGSGCSMGL DMNWVPMAAT VTAEDEAELS SSPNSAASSF HMDLCIFRRR SVSGECYDQT  180
KRVYCRGSDE DENGGSGSTT KKLRLSKEQS AFLEESFKEH NTLNPKQKVA LAKQLHLRPR  240
QVEVWFQNRR ARTKLKQTEV DCEYLKRCCD TLKEENKRLQ KELQELRALK TNSNPFYMQL  300
PATTLTMCPS CERVAPNSTS NTTPSVSLTA KAIQFPIGDN KPWKKLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	249	257	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	8e-71	HD-ZIP family protein