PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357012.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SRS

Protein Properties

Length: 209aa MW: 23492.4 Da PI: 8.2044

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	94.6	2e-29	11	70	5	64
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaa 64 +++CqdCGnqakk+C+++RCRtCCk++gf+C th+kstW p+++rr+r q + ++ + + XP_027357012.1 11 GSKCQDCGNQAKKECSYSRCRTCCKNKGFECPTHIKSTWTPVDRRRQREQLQPSPPTYQG 70 569*********************************************988877655544 PP
2	DUF702	76.4	8e-24	87	139	102	154
DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++P+ ++s+a+frcv+v+s+dd+ +e+aYqt+v+igGh+f+G+LydqG+e+ XP_027357012.1 87 EFKFPAAMNSMAIFRCVQVRSMDDAVNEIAYQTSVNIGGHLFSGLLYDQGPEQ 139 234************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MQGQEEVVLR GSKCQDCGNQ AKKECSYSRC RTCCKNKGFE CPTHIKSTWT PVDRRRQREQ 60 LQPSPPTYQG EIPQKHKQIN PYSASFEFKF PAAMNSMAIF RCVQVRSMDD AVNEIAYQTS 120 VNIGGHLFSG LLYDQGPEQS YHRGDSSKGL VDQQQNLDLT NASVHTRDSG ATTTMASTAH 180 DEPLFTAPPY PFPLAPFRPG MPYFSYPKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	2e-43	SRS family protein