PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357198.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WOX

Protein Properties

Length: 296aa MW: 32295.8 Da PI: 6.1126

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	47.9	2.3e-15	31	91	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ XP_027357198.1 31 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgTVGDANVFYWFQNRRSRSRR 91 89***************99***********************************997 PP
2	Wus_type_Homeobox	107	1.1e-34	30	93	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q XP_027357198.1 30 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQ 93 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MEDHQGQQQQ QQDPNNSPNQ QQSSEKSEPV RSRWTPKPEQ ILILESIFNS GMVNPPKDET 60 VRIRKLLEKF GTVGDANVFY WFQNRRSRSR RRQRQIQATL NQVGGANHNP FHHHHHQNNP 120 SVVANMGLGG VSNSSFANSY VSGSSSSCGG GSGGNGGEEG LGGLFLPSTQ MEFPEIDHHA 180 SATSSQVLYP SDAPNMNYQS GFGGISGFIT VFINGVATEV PRGPMDIKTV FGEDVMLVHS 240 SGVSVPTNEF GFLMQSLQHG ESYFLMQLVY NCLFGCYMAI LAADGDLPPS LNGDQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	1e-33	WOX family protein