PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357201.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 233aa MW: 25151.1 Da PI: 8.2202

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	124.7	4.7e-39	38	139	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC +C++ap+f +q ++kfa+vhk+FGasnv+kll+++p ++r++a++++ yeA+ar++dPvyG+v++il+lqqq+++l+ae+ XP_027357201.1 38 PCGACKFLRRKCIGGCIFAPHFGTDQgAAKFAAVHKVFGASNVSKLLSNIPANQRNEAAATISYEAQARLSDPVYGCVSTILALQQQVASLQAEV 132 7*********************9989*************************************************************** PP DUF260 95 allkeel 101 a+l+++l XP_027357201.1 133 AMLQNQL 139 99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MAESPGGGSA SGTRRRGTSS RRAMAALAQE EAMGLTTPCG ACKFLRRKCI GGCIFAPHFG 60 TDQGAAKFAA VHKVFGASNV SKLLSNIPAN QRNEAAATIS YEAQARLSDP VYGCVSTILA 120 LQQQVASLQA EVAMLQNQLM NNRFAYANAL QSTQLQQPNI NATTMQPAYS NNSSASTNLM 180 NMSNFNNNPG FNLAMDTAPS SHSLEPLQLS RLSQYEEEDE EESRTHLVFN RRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03760.1	3e-57	LBD family protein