PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357240.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 419aa MW: 46202.9 Da PI: 7.5792

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	88.5	5.8e-28	224	282	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s gC ++k+ve+s+++p++ ++tY+g+H+h XP_027357240.1 224 ADLWAWRKYGQKPIKGSPYPRNYYRCSSCkGCAARKQVEQSTTEPHMYIVTYTGDHKHA 282 699*********************9988**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MANEDWDLFA IVRSCKAATF TATTNTETPP TTTTTNTTVI SNTRSSQDNT CLDAFTVTQE 60 NGSFSFPNLV QPRTNEFQEL QQLLMNFNPT TTTTTTFTST STSGLGINPN STFCDVAGFI 120 GQQQIQQGHH HLVVPTPTTY TSIGAPSTTS FDRFHHNPKQ QQQQQQQPQT PEQQQQHQNQ 180 PPLQVPQISP MLLPNTQPQT PRSRKRKSQQ KKMVCHVTAD NISADLWAWR KYGQKPIKGS 240 PYPRNYYRCS SCKGCAARKQ VEQSTTEPHM YIVTYTGDHK HAKPAHRNSL AGSTRNKHST 300 TRLPATRETG LQWIKGSQSS SSSAHSPMPL SSGSLQREEA SAAAGDPECP DRPDPETEPD 360 SSSENDDDVL IPNTTAMSDA VLLGLTHFYG NKTKRDGLDP NNVPGAECES SENNRVKPG

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MANEDWDLFA IVRSCKAATF TATTNTETPP TTTTTNTTVI SNTRSSQDNT CLDAFTVTQE  60
NGSFSFPNLV QPRTNEFQEL QQLLMNFNPT TTTTTTFTST STSGLGINPN STFCDVAGFI  120
GQQQIQQGHH HLVVPTPTTY TSIGAPSTTS FDRFHHNPKQ QQQQQQQPQT PEQQQQHQNQ  180
PPLQVPQISP MLLPNTQPQT PRSRKRKSQQ KKMVCHVTAD NISADLWAWR KYGQKPIKGS  240
PYPRNYYRCS SCKGCAARKQ VEQSTTEPHM YIVTYTGDHK HAKPAHRNSL AGSTRNKHST  300
TRLPATRETG LQWIKGSQSS SSSAHSPMPL SSGSLQREEA SAAAGDPECP DRPDPETEPD  360
SSSENDDDVL IPNTTAMSDA VLLGLTHFYG NKTKRDGLDP NNVPGAECES SENNRVKPG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	208	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52830.1	3e-44	WRKY family protein