PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027357292.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 236aa    MW: 27791.1 Da    PI: 8.6779
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027357292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.45.1e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    +rienk+nrqvtfskRr g+lKKA+ELSvLCdaeva+iifss+gkl+ yss
  XP_027357292.1  9 ERIENKINRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSSRGKLFQYSS 59
                    69***********************************************96 PP
2K-box72.21.6e-2477170498
           K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     s+  + + ++++++++e+ kL++++e+L+r+qRh++Ge+Le+Ls+keLq+Le+qL+  l   R+++++ l++ ++el++k ++l+e n++L++k 
  XP_027357292.1  77 SQAGD-SFEHESQSYHEFLKLRAKYESLERTQRHFQGEELEPLSFKELQSLEKQLDITLALARQQQMKKLMARTDELREKVHNLEELNNQLQSKE 170
                     44443.4455677899****************************************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MGRGRVVLER IENKINRQVT FSKRRSGLLK KAFELSVLCD AEVALIIFSS RGKLFQYSST  60
DVNKIIERYR QCRYNKSQAG DSFEHESQSY HEFLKLRAKY ESLERTQRHF QGEELEPLSF  120
KELQSLEKQL DITLALARQQ QMKKLMARTD ELREKVHNLE ELNNQLQSKE RDGFSDLVPD  180
NNNNIQLHDT QANHFESETT LNTWFRHHEA TSKGKIIDSG TEDNQRNHHK NNGWLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.12e-58MIKC_MADS family protein