PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357297.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 990aa MW: 111463 Da PI: 7.8161

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28	5.7e-09	231	286	21	76
trihelix 21 lrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 + rgk ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e++++ e+ XP_027357297.1 231 ITRGKTRADKDREVAEFLKRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQI 286 34788999999**************************************9965544 PP

Sequence ? help Back to Top
Protein Sequence Length: 990 aa Download sequence
MGDKGDTTKK QPQQQQPQSH HHQQQTQQIS TSPKPPREES IPEARPIHHH QQQQSQIVVV 60 TGASPFISSP LYVSSGASSS PFEQQFETLN PKRARYSGQW KQLLPSPPAQ QKQSQMAMLP 120 AAESSPSPTT QHTSSNPQPL QTHPSAAASS SDTASSPSHS PMPLLSGGSG QEGNKPEVEQ 180 VHQQLRKGKY VSPVWKPNEM LWLARAWKEQ YQGCGSDSSS SRAEQHSELG ITRGKTRADK 240 DREVAEFLKR HGVNRDAKTA GTKWDNMLGE FRKVYEWERG GEREQIGKSY FRLSPYERKL 300 HRLPASFDEE VFEELSQFMG SRMRSSHGRV SSSFVSGDEA RTALAATRAL PPPPRPFKDD 360 EVPLSARTKQ LAMTSGGEAF FHGSRGGLLG LDSLLDISGS SSSKELRRIG KIRMTWEESV 420 SLWAEEGEIH RGRVRLQSSS FLNADELTCF DDAMVPCPME SFEDGPLKGF SVDRFVLGQQ 480 VKVFGRRKSS PASASSGFAE RVQLPSKALS IRSIATLDFR DPTEYYMDCL LRALPQALPT 540 LFELKRYLQE PPPEDLRFPL RRDVFEDMPQ GKELFFTTTT EPLDCRAIMY DVVGPIIRNN 600 PSLSIPTSSS RESFITLWDD CINRVISRFC PEEMVLIRKP TSTSTETMLQ DQWPNVTGFI 660 HNYCLWRGEE IDQLKEGQPD PSNTIVAKIL WTYVDLPYIL GYYAIGNTVT FCALSRSQEG 720 INIINRTDLH EVNLTTPSER LKSLVPCFRM GGLLALLGKR CLSMNNNKAF AYTDFERVCS 780 GNGVMTELTP NTCTRVFSEK RKWAAVKEVY EILDHRIPHA EFLFNSSEKD LSLSFKPRGC 840 RVKPLNWEQL VEALKYVTKA LVALHDLSFM HRDLNWEKVV RRMDRENEWF VRGFEEAAGA 900 PELNKRVVVE RGGHAPEMER GLHGVKVDVW GVGYLIRTCG LGGVPKMLRE LENRCMEQNP 960 EQRPTAADCY HHLLQLQSSL SVAAGGVLLM

Sequence ? help Back to Top

Protein Sequence Length: 990 aa Download sequence

MGDKGDTTKK QPQQQQPQSH HHQQQTQQIS TSPKPPREES IPEARPIHHH QQQQSQIVVV  60
TGASPFISSP LYVSSGASSS PFEQQFETLN PKRARYSGQW KQLLPSPPAQ QKQSQMAMLP  120
AAESSPSPTT QHTSSNPQPL QTHPSAAASS SDTASSPSHS PMPLLSGGSG QEGNKPEVEQ  180
VHQQLRKGKY VSPVWKPNEM LWLARAWKEQ YQGCGSDSSS SRAEQHSELG ITRGKTRADK  240
DREVAEFLKR HGVNRDAKTA GTKWDNMLGE FRKVYEWERG GEREQIGKSY FRLSPYERKL  300
HRLPASFDEE VFEELSQFMG SRMRSSHGRV SSSFVSGDEA RTALAATRAL PPPPRPFKDD  360
EVPLSARTKQ LAMTSGGEAF FHGSRGGLLG LDSLLDISGS SSSKELRRIG KIRMTWEESV  420
SLWAEEGEIH RGRVRLQSSS FLNADELTCF DDAMVPCPME SFEDGPLKGF SVDRFVLGQQ  480
VKVFGRRKSS PASASSGFAE RVQLPSKALS IRSIATLDFR DPTEYYMDCL LRALPQALPT  540
LFELKRYLQE PPPEDLRFPL RRDVFEDMPQ GKELFFTTTT EPLDCRAIMY DVVGPIIRNN  600
PSLSIPTSSS RESFITLWDD CINRVISRFC PEEMVLIRKP TSTSTETMLQ DQWPNVTGFI  660
HNYCLWRGEE IDQLKEGQPD PSNTIVAKIL WTYVDLPYIL GYYAIGNTVT FCALSRSQEG  720
INIINRTDLH EVNLTTPSER LKSLVPCFRM GGLLALLGKR CLSMNNNKAF AYTDFERVCS  780
GNGVMTELTP NTCTRVFSEK RKWAAVKEVY EILDHRIPHA EFLFNSSEKD LSLSFKPRGC  840
RVKPLNWEQL VEALKYVTKA LVALHDLSFM HRDLNWEKVV RRMDRENEWF VRGFEEAAGA  900
PELNKRVVVE RGGHAPEMER GLHGVKVDVW GVGYLIRTCG LGGVPKMLRE LENRCMEQNP  960
EQRPTAADCY HHLLQLQSSL SVAAGGVLLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	4e-08	Trihelix family protein