PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027357382.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 310aa    MW: 35550.2 Da    PI: 5.2223
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027357382.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.7e-172168148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W+ eEd+ll ++++ +G g+W++ a + g++Rt+k+c++rw++yl
   XP_027357382.1 21 RGPWSLEEDDLLTNYIANHGEGRWNLLAIRSGLKRTGKSCRLRWLNYL 68
                     89********************************************97 PP
2Myb_DNA-binding49.78.3e-1674117146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE++l+ +++ ++G++ W++Ia+ ++ gRt++++k++w++
   XP_027357382.1  74 RGNLTSEEQLLIFELHSKWGNR-WSKIAQQLP-GRTDNEIKNYWRT 117
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MSTTPSKSLS CYYEDDSDLR RGPWSLEEDD LLTNYIANHG EGRWNLLAIR SGLKRTGKSC  60
RLRWLNYLKP DVKRGNLTSE EQLLIFELHS KWGNRWSKIA QQLPGRTDNE IKNYWRTRIQ  120
KQARYSKFDT DRLHTSRCLH KAQESFPSTM SIQNQAIPLS FDAVSHYSEF RTIATTQITC  180
EGAFLNEGGS NCLDQHEQNS DSEHNNGSCI SSSESVNIPN MSQNLGYNSS QFLALDNNSD  240
FGIDAYDGYK ANNCAYDMDA FNLTTTMDAK DLEYPVVDCQ LSESNWLNKE FACSTSNIDE  300
LWQFRNIQRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.11e-63MYB family protein