PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027357388.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LBD
Protein Properties Length: 228aa    MW: 24051 Da    PI: 7.4731
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027357388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26083.33.7e-264107199
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlrr+C+++C++   +     p++q++++ +++k++G++ +++ll+++p + ++d+++sl+yeA+ r+ +P+ G++g++l+++++l+++
  XP_027357388.1   4 SCNGCRVLRRGCNPNCPIGSSLhwiksPNSQSNATLFLAKFYGRQALINLLTTAPSQLQPDVFKSLLYEACGRIVNPIFGSAGLLLAGSWHLCEA 98 
                     6*********************9************************************************************************ PP

          DUF260  91 kaelallke 99 
                     +ae++l ++
  XP_027357388.1  99 AAEAVLNGA 107
                     ***998766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MRLSCNGCRV LRRGCNPNCP IGSSLHWIKS PNSQSNATLF LAKFYGRQAL INLLTTAPSQ  60
LQPDVFKSLL YEACGRIVNP IFGSAGLLLA GSWHLCEAAA EAVLNGAPIQ QDHLDGSVSL  120
QPQDCDIRHA VKSGKSRGSD GHHKVKSGTS QFKRRAKKLK ADSSVAELVG VADSGSELGG  180
SVSRDSGSGV TRVSEHKSIG GEGDSNFGEI VEPTPADDGE LELELTLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67100.16e-57LBD family protein