PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357485.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 511aa MW: 55984.9 Da PI: 6.1374

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357485.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.3e-11	327	369	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_027357485.1 327 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 369 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MSRINPSVAW MDEREDQNSA SASWARTSRP SNIITTDRNT NTNIGFVENT NRDDLGSICA 60 FKPMLEVDEE WYMTNHNHHQ DMTFSPNFAD PDNLLLHAVD SSSSCSPSSS VFNNLDPSPS 120 QVQYFLPSNP KPTTLSSLLN PFDMACEVGF LDPQASSSLP LLSRASSLLG NQLALPSMNS 180 ETQLTTTPQS STAFAGFQNL EEGSASKPLF LNRSKILRPL ESLPPSGAQP TLFQKRAALR 240 KNMGSEGGRG KCEVGEGSDK KRKEEVEDVS FDGSGLNYDS DDLTESNYNK VEEISGKNGG 300 NSSNGNSTVT GLDQKGKKKG MPAKNLMAER RRRKKLNDRL YMLRSVVPKI SKMDRASILG 360 DAIEYLKELL QRINDLHNEL ESTPAGSSLT PASSFHPLTP TPPALPSRIK EELCPSSLPS 420 PSGQPARVEV RLREGRAVNI HMFCARKPGL LLSTMRVLDN LGLDIQQAVI SCFNGFAMDI 480 FRAEQCKEGQ DVHPEQIKAV LLDSAGFNGM I

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MSRINPSVAW MDEREDQNSA SASWARTSRP SNIITTDRNT NTNIGFVENT NRDDLGSICA  60
FKPMLEVDEE WYMTNHNHHQ DMTFSPNFAD PDNLLLHAVD SSSSCSPSSS VFNNLDPSPS  120
QVQYFLPSNP KPTTLSSLLN PFDMACEVGF LDPQASSSLP LLSRASSLLG NQLALPSMNS  180
ETQLTTTPQS STAFAGFQNL EEGSASKPLF LNRSKILRPL ESLPPSGAQP TLFQKRAALR  240
KNMGSEGGRG KCEVGEGSDK KRKEEVEDVS FDGSGLNYDS DDLTESNYNK VEEISGKNGG  300
NSSNGNSTVT GLDQKGKKKG MPAKNLMAER RRRKKLNDRL YMLRSVVPKI SKMDRASILG  360
DAIEYLKELL QRINDLHNEL ESTPAGSSLT PASSFHPLTP TPPALPSRIK EELCPSSLPS  420
PSGQPARVEV RLREGRAVNI HMFCARKPGL LLSTMRVLDN LGLDIQQAVI SCFNGFAMDI  480
FRAEQCKEGQ DVHPEQIKAV LLDSAGFNGM I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	317	335	KKKGMPAKNLMAERRRRKK
2	329	336	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-129	bHLH family protein