PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357553.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 259aa MW: 29632.1 Da PI: 9.9058

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	81.7	4.8e-26	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ienk+ rqvtfskRr g+ KKA+E+SvLCda+va+i+f +g+l+eyss XP_027357553.1 9 KQIENKISRQVTFSKRRMGLRKKAHEISVLCDAQVALIVFNAKGRLFEYSS 59 78***********************************************96 PP
2	K-box	88.8	1e-29	96	188	8	100
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++ + +++ + kL ++e L++++R+++G+dL+ Ls++eLq+Le+qL+++lk+iR++Kn+++ e+i+elqkk kel+e+n L+kk++e XP_027357553.1 96 GAGDESQGNWSLQCFKLTGKVEVLEKNLRNFVGQDLDHLSMRELQSLEHQLDTALKRIRTRKNQIMNESISELQKKAKELKEHNSILEKKIKE 188 566788899*********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MGRGRVQLKQ IENKISRQVT FSKRRMGLRK KAHEISVLCD AQVALIVFNA KGRLFEYSSE 60 SRAPHLQSWE NALSAKSMEN VLERYERHAH SVQLVGAGDE SQGNWSLQCF KLTGKVEVLE 120 KNLRNFVGQD LDHLSMRELQ SLEHQLDTAL KRIRTRKNQI MNESISELQK KAKELKEHNS 180 ILEKKIKEQE KTMAEPTHCG PEILGQTCLP VLQPQKRLIP SLTLGENLQA ATIEEVVEAR 240 TVPSTSTLIP PWMLHHFTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60910.1	2e-79	MIKC_MADS family protein