PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357554.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 244aa MW: 27942.2 Da PI: 9.7499

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357554.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	81.8	4.4e-26	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ienk+ rqvtfskRr g+ KKA+E+SvLCda+va+i+f +g+l+eyss XP_027357554.1 9 KQIENKISRQVTFSKRRMGLRKKAHEISVLCDAQVALIVFNAKGRLFEYSS 59 78***********************************************96 PP
2	K-box	89.1	8e-30	81	173	8	100
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++ + +++ + kL ++e L++++R+++G+dL+ Ls++eLq+Le+qL+++lk+iR++Kn+++ e+i+elqkk kel+e+n L+kk++e XP_027357554.1 81 GAGDESQGNWSLQCFKLTGKVEVLEKNLRNFVGQDLDHLSMRELQSLEHQLDTALKRIRTRKNQIMNESISELQKKAKELKEHNSILEKKIKE 173 566788899*********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MGRGRVQLKQ IENKISRQVT FSKRRMGLRK KAHEISVLCD AQVALIVFNA KGRLFEYSSE 60 SSMENVLERY ERHAHSVQLV GAGDESQGNW SLQCFKLTGK VEVLEKNLRN FVGQDLDHLS 120 MRELQSLEHQ LDTALKRIRT RKNQIMNESI SELQKKAKEL KEHNSILEKK IKEQEKTMAE 180 PTHCGPEILG QTCLPVLQPQ KRLIPSLTLG ENLQAATIEE VVEARTVPST STLIPPWMLH 240 HFTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60910.1	1e-83	MIKC_MADS family protein