PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357561.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 423aa MW: 45700.1 Da PI: 6.3802

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl XP_027357561.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.7	9.8e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_027357561.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKMG 120 IDPVTHKPKN DALLSSDGQS KTAANLSHMA QWESARLEAE ARLVRESKLR SHSLQQQLGS 180 SSTTFASSSS TFASTSSAST SASVLNNNNK QEPPPPSSHV PSRSSLDVLK AWNNGGWLKS 240 SEGNGGIGST VGISGDLESP TSTLSFSENA PPTMTSGGIG GENNNNSSNN NNNAVPMIEF 300 VGSSGNSSSL VKEEGEQEWK GYESSMSTFS SGLHELTMSM EGAWASESLR ASGSHEDVIV 360 EEGFTNLLLK THSDDRSLSS EGGGESNNGD GGGSGSDFYE DNNNYWNSIL NLVNSSPSDS 420 PMF

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKMG  120
IDPVTHKPKN DALLSSDGQS KTAANLSHMA QWESARLEAE ARLVRESKLR SHSLQQQLGS  180
SSTTFASSSS TFASTSSAST SASVLNNNNK QEPPPPSSHV PSRSSLDVLK AWNNGGWLKS  240
SEGNGGIGST VGISGDLESP TSTLSFSENA PPTMTSGGIG GENNNNSSNN NNNAVPMIEF  300
VGSSGNSSSL VKEEGEQEWK GYESSMSTFS SGLHELTMSM EGAWASESLR ASGSHEDVIV  360
EEGFTNLLLK THSDDRSLSS EGGGESNNGD GGGSGSDFYE DNNNYWNSIL NLVNSSPSDS  420
PMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	1e-118	MYB family protein