PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027357895.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 1120aa MW: 123865 Da PI: 6.6746

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027357895.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.2	2.7e-22	132	233	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ +W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++++ XP_027357895.1 132 FCKQLTASDTSTHGGFSVPRRAAEKIfppldySMQPPA-QELVARDLHDTVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI--RDEK 223 99***************************9545444.38********************************************..5688 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 ++l+++++r+ XP_027357895.1 224 QQLLLGIRRA 233 889**997 PP
2	Auxin_resp	120.4	1.4e-39	258	341	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPras+seFv++++k+ ka++ ++ s+GmRf+m+feteds +rr++Gt++g+sdldpvrW+nS+Wr+L+ XP_027357895.1 258 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYsHQPSLGMRFRMMFETEDSGTRRYMGTITGISDLDPVRWKNSQWRNLQ 341 79******************************9989******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1120 aa Download sequence
MKTQPQPQPD GASAAPNPCE EKKSINPELW QACAGPLVNL PPAGTHVIYF PQGHSEQVAA 60 SLKKDVDAQA PNYPNLPSKL LCLLHNLTLH ADPETDEVYA QMTLQPVPSF DKDALLRSDL 120 ALKSTKPQPD FFCKQLTASD TSTHGGFSVP RRAAEKIFPP LDYSMQPPAQ ELVARDLHDT 180 VWTFRHIYRG QPKRHLLTTG WSLFVSGKRL FAGDSVLFIR DEKQQLLLGI RRANRQPTNI 240 SSSVLSSDSM HIGILAAAAH AAANNSPFTV FYNPRASPSE FVIPLAKYYK AVYSHQPSLG 300 MRFRMMFETE DSGTRRYMGT ITGISDLDPV RWKNSQWRNL QVGWDESTAG EKRSRVSIWE 360 IEPVTAPFFI CPPPFFRSKR PRQPGMPDDE LSDFDSLFKR TMPWLGDDMC MKDPQGLPGL 420 SLAQWMNMQQ NPALASSLQP NYVPSLTGSV LQNLPGADIS RQLGFSSPQI SQSNNVAFNA 480 QRLLQTAQQL DHLQKLPSTS STLGTALPPQ QQLGDITQQP RQNMANQTLP QSQVQAQLLH 540 PQNLVQTNNI LQQQQPSIQN HQLHRSLSQN PPQQQQQQQT IISQNQQQNL IQSPMPDHVQ 600 QLQMSDSQIP LQFLHKLQQQ KQTLLAQQSA FQQPTQLTQI QDQQRQLLDK THNLSRAQAP 660 GQMLEIPPIL QNSLPEANSI THQMAKANGR NNIQLCHLPQ QPKLQQQQPG LLSEMAGHMA 720 LPPTPTTNQL SAAGSSILTG AAGAGQSVIT DDVPSCSTSP STNNCANALP SLINSRFQRR 780 TTVGDDMAQS TATILSSGAL ETMPSSANLL KDLQPKSEVK PSLNISKNQN QGHFGPQMYL 840 NGSTAQTDYL DTSSSTTSVC ISQSDAHMHQ NNNPLSYNPQ SMLFRDNSQD GDVQADARSN 900 IPYGNNIDNQ MGIPLNPDSL LTKGTLGLGK DLSNNFSSDG MLGNYENNRD AQQELSSSMV 960 SQTFGVPDMT FNSIDSTIDD SSFLNRGPWA PPPAPPPPPL PPAQFQRMRT YTKVYKRGAV 1020 GRSIDITRYS GYEELKQDLA RRFGIEGQME DRQRIGWKLV YVDHENDVLL VGDDPWEDFV 1080 NCVRCIKILS PQEVQQMSLD GDFGNGLPNQ ACSSSDGGNT

Sequence ? help Back to Top

Protein Sequence Length: 1120 aa Download sequence

MKTQPQPQPD GASAAPNPCE EKKSINPELW QACAGPLVNL PPAGTHVIYF PQGHSEQVAA  60
SLKKDVDAQA PNYPNLPSKL LCLLHNLTLH ADPETDEVYA QMTLQPVPSF DKDALLRSDL  120
ALKSTKPQPD FFCKQLTASD TSTHGGFSVP RRAAEKIFPP LDYSMQPPAQ ELVARDLHDT  180
VWTFRHIYRG QPKRHLLTTG WSLFVSGKRL FAGDSVLFIR DEKQQLLLGI RRANRQPTNI  240
SSSVLSSDSM HIGILAAAAH AAANNSPFTV FYNPRASPSE FVIPLAKYYK AVYSHQPSLG  300
MRFRMMFETE DSGTRRYMGT ITGISDLDPV RWKNSQWRNL QVGWDESTAG EKRSRVSIWE  360
IEPVTAPFFI CPPPFFRSKR PRQPGMPDDE LSDFDSLFKR TMPWLGDDMC MKDPQGLPGL  420
SLAQWMNMQQ NPALASSLQP NYVPSLTGSV LQNLPGADIS RQLGFSSPQI SQSNNVAFNA  480
QRLLQTAQQL DHLQKLPSTS STLGTALPPQ QQLGDITQQP RQNMANQTLP QSQVQAQLLH  540
PQNLVQTNNI LQQQQPSIQN HQLHRSLSQN PPQQQQQQQT IISQNQQQNL IQSPMPDHVQ  600
QLQMSDSQIP LQFLHKLQQQ KQTLLAQQSA FQQPTQLTQI QDQQRQLLDK THNLSRAQAP  660
GQMLEIPPIL QNSLPEANSI THQMAKANGR NNIQLCHLPQ QPKLQQQQPG LLSEMAGHMA  720
LPPTPTTNQL SAAGSSILTG AAGAGQSVIT DDVPSCSTSP STNNCANALP SLINSRFQRR  780
TTVGDDMAQS TATILSSGAL ETMPSSANLL KDLQPKSEVK PSLNISKNQN QGHFGPQMYL  840
NGSTAQTDYL DTSSSTTSVC ISQSDAHMHQ NNNPLSYNPQ SMLFRDNSQD GDVQADARSN  900
IPYGNNIDNQ MGIPLNPDSL LTKGTLGLGK DLSNNFSSDG MLGNYENNRD AQQELSSSMV  960
SQTFGVPDMT FNSIDSTIDD SSFLNRGPWA PPPAPPPPPL PPAQFQRMRT YTKVYKRGAV  1020
GRSIDITRYS GYEELKQDLA RRFGIEGQME DRQRIGWKLV YVDHENDVLL VGDDPWEDFV  1080
NCVRCIKILS PQEVQQMSLD GDFGNGLPNQ ACSSSDGGNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein