PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358149.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 466aa MW: 52278.4 Da PI: 8.894

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.5e-06	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_027358149.1 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP
2	zf-C2H2	14.4	0.00011	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k + +s++k H++t+ XP_027358149.1 134 WVCERCSKGYAVQSDYKAHLKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MLANNLSPSS VPTSEPFPCA ENGTATNKRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVRKRVFVC PEPTCLHHDP CHALGDLVGI 120 KKHFRRKHSN HKQWVCERCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD 180 ACNMGRLRPE TQPLQPAACL SRTASSPSPS SETNFSTAPW PTRMIIPKPT TDQHPTIFMN 240 NPTPLTTAET SSKNNKLHPN LELQLSTTNN NNNPNTTNTS NSNPIEAAIS TSLSPKRDHH 300 ENHSTHLQLS IGSSDMSEKN ESNRNSSEKS SNSNGEKQSM ALLRVQEQAR EHLRIAMAEK 360 AYAEEARKQA KRQIELAEQE FTNAKRIRQQ AQSELDKAYA LKEHAMKQIN STMLQITCHA 420 CKQHFQARNA TPDENSLVLS YVSSAITTEG GEVENDNGKD HGKNNN

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MLANNLSPSS VPTSEPFPCA ENGTATNKRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE  60
ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVRKRVFVC PEPTCLHHDP CHALGDLVGI  120
KKHFRRKHSN HKQWVCERCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD  180
ACNMGRLRPE TQPLQPAACL SRTASSPSPS SETNFSTAPW PTRMIIPKPT TDQHPTIFMN  240
NPTPLTTAET SSKNNKLHPN LELQLSTTNN NNNPNTTNTS NSNPIEAAIS TSLSPKRDHH  300
ENHSTHLQLS IGSSDMSEKN ESNRNSSEKS SNSNGEKQSM ALLRVQEQAR EHLRIAMAEK  360
AYAEEARKQA KRQIELAEQE FTNAKRIRQQ AQSELDKAYA LKEHAMKQIN STMLQITCHA  420
CKQHFQARNA TPDENSLVLS YVSSAITTEG GEVENDNGKD HGKNNN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	33	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-141	C2H2 family protein