PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027358387.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family Trihelix
Protein Properties Length: 580aa    MW: 65599.1 Da    PI: 5.6247
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027358387.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix89.92.7e-2867150186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW++qe+laL+++r +m+  +r+++lk+plWeevs+k++e g++rs+k+Ckek+en+ k+ k++ke+++++   + +t+++fdql+
  XP_027358387.1  67 RWPRQETLALLKIRLDMDAVFRDSSLKAPLWEEVSRKLAELGYHRSAKKCKEKFENVYKYNKRTKENKSGK--SHGKTYKFFDQLQ 150
                     8*****************************************************************99996..55667******98 PP
2trihelix103.41.7e-32405490187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW+k ev+aLi++r+ +e +++++  k+plWe++s+ m++ g++rs+k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf++l+a
  XP_027358387.1 405 RWPKAEVHALIRLRTTLEIKYQENGPKAPLWEDISIGMQRLGYNRSAKRCKEKWENINKYFKKVKESNKER-PEDSKTCPYFHELDA 490
                     8********************************************************************98.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    
MQLGEPSVPE ISSPNTAVTA EPPEETAHEG VNGGEMVGID VDANSSEDKG IEGGGDESNK  60
INFGGNRWPR QETLALLKIR LDMDAVFRDS SLKAPLWEEV SRKLAELGYH RSAKKCKEKF  120
ENVYKYNKRT KENKSGKSHG KTYKFFDQLQ ALENQFTVSY TPKSQAILTT TLSNVTTTFP  180
FTNPTLISPS PPTNATTTTT TSMTNPPNPS PPQNHSNHNV PHSFPNMNNL FSTTTSTSSS  240
TASDEDLEER YKRKRKWKDY FKRLTRKVLL KQEEMQNKFL EAMDKRERDR LAQQDNWRMQ  300
EIARINRDHE ILIQERSTAA AKDAAVIALL QNLSGQQNPM QLLPPSFALP SVSQIEPSQQ  360
KEIIPQTQSP ILTPNNNFEI KGANNGHSTT STITTASLVS SSSSRWPKAE VHALIRLRTT  420
LEIKYQENGP KAPLWEDISI GMQRLGYNRS AKRCKEKWEN INKYFKKVKE SNKERPEDSK  480
TCPYFHELDA LYKEKSKSQN PFGISFQNVI PNEMMMMEPL MVQPEQQWRP PPESLEEGIG  540
KENANECQEK EEEDGDDDAE EYGDSVEDEG ASLSEIATNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.27e-69Trihelix family protein