PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027358427.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB_related
Protein Properties Length: 318aa    MW: 35204.9 Da    PI: 9.5552
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027358427.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.31.5e-1263107147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_027358427.1  63 RENWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 107
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MVSKNPNPPE GFYLDPTGMA LPGLPPFASV SAAAATATAA SATNSSEEAA KKIRKPYTIT  60
KSRENWTEPE HDKFLEALQL FDRDWKKIEA FVGSKTVIQI RSHAQKYFLK VQKSGTSEHL  120
PPPRPKRKAA HPYPQKASKN APVLSQVPGS FQSSSALLEP GYILKNDSLP MLNTPILNTV  180
VSWSNNTSQT ANLSPVTKVN NPCSSSESTP KVWPVGESKV QGNKNHPLRV LPDFTQVYSF  240
IGSVFDPGAA EHLQKLKKMD RIDVETVLLL MRNLSINLTS PDFEDHRKLL SSYEVEPETN  300
NYINAERPMH DEQLKSAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-106MYB_related family protein