PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027358446.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 356aa    MW: 39735.5 Da    PI: 7.8949
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027358446.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.93.5e-08119139526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck Gd C FaHg
  XP_027358446.1 119 ACPDFRK-GNCKKGDACEFAHG 139
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MMLGEHHRAN PTVHVPPWPI HDDPTAEMYS PYYLQEALTA LQRYLPSNET DADSDSEVPG  60
RESDAPVDAY SCDHFRMFEF KVRRCARGRS HDWTECPYAH PGEKARRRDP RKFHYSGTAC  120
PDFRKGNCKK GDACEFAHGV FECWLHPARY RTQPCKDGTS CRRRVCFFAH TPEQLRLMPQ  180
QSPRSANSAD SYDGSPLRQV SMPFMSSPAS VSPPESPPMS PMTQSLSRSL GSSSMNEMVA  240
SLRNLQLGKL KSIPSSRNVQ MGSPGFGSPR GSVLRPGFSS LPSTPTQAPG RSGVNYFELW  300
DQSCEEEPVM ERVESGRDIR AKMFEKLSKE NSLDGSGSGR QMGGAPDFGW VSELVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-142C3H family protein