PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358772.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 386aa MW: 43702.3 Da PI: 9.9433

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58	2.1e-18	179	225	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ed lv++vkq+G + W+ Ia+ ++ gR +kqc++rw+++l XP_027358772.1 179 KGQWTPDEDRALVELVKQYGLKKWSHIAKSLN-GRIGKQCRERWHNHL 225 799***************************.***********97 PP
2	Myb_DNA-binding	46.7	7.1e-15	231	273	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT eEd l++ +++ G++ W+ Iar+++ gRt++ +k++w+ XP_027358772.1 231 KDSWTLEEDIMLIRSHQEVGNK-WAEIARRLP-GRTENTIKNHWN 273 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEFNPSFQGQ HPYLSSFFPE NPCSKQETQT MLPLQSSILV APSPPSNHSP MFLPNTLNHY 60 LNVPNYLHHP SSSITNPFYG TIGDGSQGGF VNTHHRHPVS TLAPNNNKME PLHGNHQRDK 120 VIWDFSQKTL VEPSQASSSR LINPLSPFPI SSDHGLVMSD QKRVKEENNP NIPNANLIKG 180 QWTPDEDRAL VELVKQYGLK KWSHIAKSLN GRIGKQCRER WHNHLRPNIR KDSWTLEEDI 240 MLIRSHQEVG NKWAEIARRL PGRTENTIKN HWNATKRRQR CKKPKNKSST PEGSLLQAYI 300 KRVTENEEAA KKLKKSMCNK NKNVLDCSCN DLALMFPYDH SPHNVLNGNG NSSGYAPIQV 360 NNNDDGRNLL YGAMMRCSDG KLGSKG

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEFNPSFQGQ HPYLSSFFPE NPCSKQETQT MLPLQSSILV APSPPSNHSP MFLPNTLNHY  60
LNVPNYLHHP SSSITNPFYG TIGDGSQGGF VNTHHRHPVS TLAPNNNKME PLHGNHQRDK  120
VIWDFSQKTL VEPSQASSSR LINPLSPFPI SSDHGLVMSD QKRVKEENNP NIPNANLIKG  180
QWTPDEDRAL VELVKQYGLK KWSHIAKSLN GRIGKQCRER WHNHLRPNIR KDSWTLEEDI  240
MLIRSHQEVG NKWAEIARRL PGRTENTIKN HWNATKRRQR CKKPKNKSST PEGSLLQAYI  300
KRVTENEEAA KKLKKSMCNK NKNVLDCSCN DLALMFPYDH SPHNVLNGNG NSSGYAPIQV  360
NNNDDGRNLL YGAMMRCSDG KLGSKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27785.1	5e-60	MYB family protein