PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027358850.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 676aa MW: 75417.1 Da PI: 7.2082

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027358850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	81	102	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H XP_027358850.1 81 KCDKCSREFCSSINYRRHIRVH 102 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MPVTKLKVSD TPDVMKTEDR IDTIIKQAIG REPVLSFPRA SESPVQWIQL LHALDQQGVN 60 NSFSEFPGWP LLSPLKVQLQ KCDKCSREFC SSINYRRHIR VHHRLKKLDK DYTKTRDLLG 120 AYWDKLSVEE AKEVVSFENV MLEEVQGSSI LNALTSLVRK QGFSPLPQYY LRAGAALLDI 180 VQSKPSSFPI SSQELFSTLD DASEKTCLWG TAVSMQRYVF DGEAGKIGLE PKNLVACTSF 240 LLEQKLAWLA DKDAEALKCQ KQLVEEEEAA QKRQAEILER KRQKKLRQKE QKAREQRGKD 300 ETEIKGNTAS TVKALSPEEA SLDTYNFPEN ALSHVPFQCP ETSEGIDGET DTHSGYEFVT 360 DQNIGRQSAH GQNHQHIAVA RWQQGLPKSQ WAVANALHTN QNSQISKVDL IQKHGTHRDS 420 SKVWSRKPKT EIDKVVLKTI IEGESNQVKN HEVLIGSISV NLGNSNQLEG NMVASQEDCM 480 VENVAKQNSF QDKPTKPDFV TCGNNRLTVK CWRPVSRLET KDPSPVQRGE TDVDALHGNG 540 GGQNLSGPSC LGLCSVDGND IGFENDFSHL EGRVDPGSLR FSSCAAKAFL AQRWKEAILS 600 DHVTLVVSHD SEPPGCQEIQ DFKIAECQSS DVDKCNIPAI AENTLPGTTR VTKSKPRLKS 660 EKGTKIKYIP KRMTTT

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MPVTKLKVSD TPDVMKTEDR IDTIIKQAIG REPVLSFPRA SESPVQWIQL LHALDQQGVN  60
NSFSEFPGWP LLSPLKVQLQ KCDKCSREFC SSINYRRHIR VHHRLKKLDK DYTKTRDLLG  120
AYWDKLSVEE AKEVVSFENV MLEEVQGSSI LNALTSLVRK QGFSPLPQYY LRAGAALLDI  180
VQSKPSSFPI SSQELFSTLD DASEKTCLWG TAVSMQRYVF DGEAGKIGLE PKNLVACTSF  240
LLEQKLAWLA DKDAEALKCQ KQLVEEEEAA QKRQAEILER KRQKKLRQKE QKAREQRGKD  300
ETEIKGNTAS TVKALSPEEA SLDTYNFPEN ALSHVPFQCP ETSEGIDGET DTHSGYEFVT  360
DQNIGRQSAH GQNHQHIAVA RWQQGLPKSQ WAVANALHTN QNSQISKVDL IQKHGTHRDS  420
SKVWSRKPKT EIDKVVLKTI IEGESNQVKN HEVLIGSISV NLGNSNQLEG NMVASQEDCM  480
VENVAKQNSF QDKPTKPDFV TCGNNRLTVK CWRPVSRLET KDPSPVQRGE TDVDALHGNG  540
GGQNLSGPSC LGLCSVDGND IGFENDFSHL EGRVDPGSLR FSSCAAKAFL AQRWKEAILS  600
DHVTLVVSHD SEPPGCQEIQ DFKIAECQSS DVDKCNIPAI AENTLPGTTR VTKSKPRLKS  660
EKGTKIKYIP KRMTTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	279	286	ERKRQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-127	C2H2 family protein