PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027359122.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 301aa    MW: 33533.5 Da    PI: 8.4694
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027359122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.34e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEde lv++++++G g+W+t ++  g+ R++k+c++rw +yl
   XP_027359122.1 14 RGAWTPEEDEALVQYINKHGHGSWRTLPKQAGLLRCGKSCRLRWINYL 61
                     89******************************99************97 PP
2Myb_DNA-binding55.21.6e-1767110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++TteE+ ++++++ +lG++ W++Ia+ ++ gRt++++k++w++
   XP_027359122.1  67 RGPFTTEEENKIIQLHGMLGNR-WAAIASQIP-GRTDNEIKNYWNT 110
                      89********************.*********.***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGKAPCCDKH GVRRGAWTPE EDEALVQYIN KHGHGSWRTL PKQAGLLRCG KSCRLRWINY  60
LRPDIKRGPF TTEEENKIIQ LHGMLGNRWA AIASQIPGRT DNEIKNYWNT QLKKRLPNKL  120
GHSKGPQQYP FSPDHSIAKS ESPSTRHMVQ WESARVEAEA RLSMESALIN SWSTTETYPD  180
HFLQLWHSDV GKSFRMIKGK GVVCQSPLSQ ASSSSKLESC SDVSLQAKNT ANSAIANKSH  240
EQGSGYKAKL EDGTAGSESG YYEFLDTSDS ALNQLLDVPD SGIGFLGQNE SFLNTLYGRC  300
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-93MYB family protein