PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027359123.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 292aa    MW: 33294 Da    PI: 6.9579
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027359123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.58.5e-151562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd +l + + ++G g+W++++ + g+ R +k+c++rw +yl
   XP_027359123.1 15 KGLWSPEEDNKLRNHILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYL 62
                     678*******************************************97 PP
2Myb_DNA-binding52.11.6e-1668113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg ++++E++ +  ++++lG++ W+ Ia++++ gRt++++k++w++yl
   XP_027359123.1  68 RGVFSKQEEDTIMTLHHMLGNK-WSQIAQHLP-GRTDNEIKNYWHSYL 113
                      899*******************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MGCHQLEKSK PKYRKGLWSP EEDNKLRNHI LKHGHGCWSS VPIKAGLQRN GKSCRLRWIN  60
YLRPGLKRGV FSKQEEDTIM TLHHMLGNKW SQIAQHLPGR TDNEIKNYWH SYLKKKVVKA  120
KEIESDKQVH YASSSSDTMD NSFSPQKFAT QDPNYGLFEN MDKSTPPFDH SFSQNYNFSM  180
ETSQSSLPKL LFAEWLSVDH VNGGSSVNSD DSLVLGNEFD QNSTFQDAIM HMSEGHFGEG  240
YHHNSLIQSS ATEVYNSQLK LSNQVDGNDF DHCVAGVDFC SNFSLTNDTM YV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48920.16e-64MYB family protein