PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027359175.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GATA
Protein Properties Length: 237aa    MW: 26462 Da    PI: 8.5768
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027359175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.12.1e-17164198135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C +  Tp+WR gp g+ktLCnaCG++y++ +l
  XP_027359175.1 164 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 198
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEWLSVFVED CFSSRPSCLL APTGVEATST STKPSSTMHR PQQNQCQLPN FAVPGKARSK  60
RKRLSAPRTK DTLNTWSQHL SPESDGLGAD PPLLKQAYWL ADSELIVPNK KDELEEVTKV  120
GELEEGEVME NSIVRKEKLG DCEVEVKNNN DNNNNGQHPI PRRCTHCLAQ RTPQWRAGPL  180
GPKTLCNACG VRYKSGRLLP EYRPAKSPTF VSYLHSNSHK KVMEMRMGAL SSIPAEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-41GATA family protein