PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027359248.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 296aa    MW: 33523.3 Da    PI: 6.9544
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027359248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.13e-18102154456
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     + +++ eq+++Le+ Fe  +++  e++ +LAk lgL+ rq+ +WFqNrRa++k
  XP_027359248.1 102 KKRLSLEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWK 154
                     556899**********************************************9 PP
2HD-ZIP_I/II128.23.4e-41100192193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekk+rls eqvk+LE+sFe  +kLeperK++la++Lglqprq+a+WFqnrRAR+ktkqlEk+ye+Lk++++a+k++ne+L++++++L++el++
  XP_027359248.1 100 EKKKRLSLEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEVLKKQFEAVKADNESLKAQNQKLHAELQT 192
                     69***************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MNDITTTPSP SPSPSSTMAF PPSHTFLFQT HEDHDHQHHL RSSSSSFNAF PSFPPQHFQG  60
GGAGAGFMMK RSMSFSGIEN KCDEVHGDDE LSDDGSQIGE KKKRLSLEQV KALEKSFELG  120
NKLEPERKMQ LAKALGLQPR QIAIWFQNRR ARWKTKQLEK EYEVLKKQFE AVKADNESLK  180
AQNQKLHAEL QTLKGRDCCE TGTRSLKKET EGSWSNGSEN SSDINLDLSR TPVMNSPVSS  240
QNGKSLLPTS LKPTSITQLL QCSSRSDLQD ESFCNMFHNI DEQQNFWPWP EQHQFH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149157RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01220.13e-67HD-ZIP family protein