PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359564.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 468aa MW: 51566.6 Da PI: 5.299

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.4e-17	48	92	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+ XP_027359564.1 48 REKWTEEEHQKFLEALKLYGRG-WRQIEEHIG-TKTAVQIRSHAQKF 92 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MEMQDQIEGT RSTIFGTASN CLSNGGKQSE NVARIPSVRK PYTITKQREK WTEEEHQKFL 60 EALKLYGRGW RQIEEHIGTK TAVQIRSHAQ KFFSKVVRES EGSAESSIQP INIPPPRPKR 120 KPLHPYPRKS VDSFKGHTVP NETEIFPSTN MLVAEKDTRS PTSVLSTVGS EAFGSAFSEQ 180 TTRCLSPNSC TTDIHSVSLS PVEKENDCMT SEPSEEEEKG PLASVPLSTI SNPNICMKSE 240 FSSKESECCK DATANMPHIT SIKLFGRTVS MVGNQKPLNI DDENGEPIKS DEVDDVENEK 300 LGQSAESEQV ETKLSLGSCG GDWHITADAD GANLTNIEPP KENLCLSECA LDASFPRWSL 360 YQGLPAFYLG PCNQVLNPMS LQPSLKARTR EESSCTGSNT ESVCDMENQG KNSDAVDFEC 420 HKYHEGGGAP QKCARGFVPY KRCLAKRDGN SLIVAMEERE GQRARVCS

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MEMQDQIEGT RSTIFGTASN CLSNGGKQSE NVARIPSVRK PYTITKQREK WTEEEHQKFL  60
EALKLYGRGW RQIEEHIGTK TAVQIRSHAQ KFFSKVVRES EGSAESSIQP INIPPPRPKR  120
KPLHPYPRKS VDSFKGHTVP NETEIFPSTN MLVAEKDTRS PTSVLSTVGS EAFGSAFSEQ  180
TTRCLSPNSC TTDIHSVSLS PVEKENDCMT SEPSEEEEKG PLASVPLSTI SNPNICMKSE  240
FSSKESECCK DATANMPHIT SIKLFGRTVS MVGNQKPLNI DDENGEPIKS DEVDDVENEK  300
LGQSAESEQV ETKLSLGSCG GDWHITADAD GANLTNIEPP KENLCLSECA LDASFPRWSL  360
YQGLPAFYLG PCNQVLNPMS LQPSLKARTR EESSCTGSNT ESVCDMENQG KNSDAVDFEC  420
HKYHEGGGAP QKCARGFVPY KRCLAKRDGN SLIVAMEERE GQRARVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	2e-50	MYB_related family protein