PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027359857.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 875aa MW: 96921.7 Da PI: 4.558

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027359857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.4	1.2e-11	726	769	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+W++++ el+++av+q+G++ ++ I + ++ +t+ q+k+++ k XP_027359857.1 726 RGKWSKQDTELFYEAVRQFGTD-FSMIQQLFP-DKTRHQIKLKYKK 769 89******************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 875 aa Download sequence
MPKAKLKQLP RKEISVLDHA TSSTTFSDRP QVEIPNSEDA TNPKTKNSQQ VSAKGHTVAL 60 VDDHLHSTIA ASDIDQIFTN FPRSASEAGP VDFEVGSGTN IIPQTNLNTE NELNNVTAPC 120 TTCSIIDGTQ EPPKNGEGSF LDSSKCLELV DNSLQVETDV GFKSDSDNKV AIFESNIQSK 180 SNFGREQEVV SAEFELDPFS NVLPDPGARN ARKFQPKIKP RPRVGNSAAN ASSSSNVMTE 240 KSVELPNSCM NEFQSNGDGS DRLNQSTSLP LPSQILRTTD LPNKPDYMSP SIPFSEDNTG 300 LAPVIPSQLD SLNAMLLEVA THNGTRDWPS SFGKSSGEAA DIFSGLESLD DFLTQAASDT 360 GKPALHSFNE KGTDENFVNH NCRSINSFGV CDTTQVQRCP MYQTTQDSIT FNEAAVLNED 420 DTHTNNRRLE TKYWFQEVVD LNPACPGDDV FEYQSMKSGT DPTSETPVHE ELTNAADSPT 480 LADFLHADVA REKDANERTK DGSISSSSRK NKRSSIIGEE DNDGNTSRQL RKQTAHKPTN 540 SSLNDDVEDD DNLDANGDEL EENGDDHEVD YSSKKGRAST SSKKKSGAKN GKTTQKRKRA 600 NDDLEKTIKE PPKKFSHSTQ RRKRTVDKAL LEIPEDELDP RTLPIKDIIL LAEYRERLAK 660 KEGTPQTTST YQSGGDFLHE ASANYEEEEI FGSEDGRDPD DDRANGRIPS ASSLFNYQSF 720 MEKAPRGKWS KQDTELFYEA VRQFGTDFSM IQQLFPDKTR HQIKLKYKKE ERQHPLRLSD 780 AVNNRAKDHS HFKLVIERLE LASTKAEDDP SRDASDFMMG EEVTDLTPGT NEEVATTEQG 840 ADVKAQEDSA AVHSPEQSDD SDDDFQKWAQ YKSAY

Sequence ? help Back to Top

Protein Sequence Length: 875 aa Download sequence

MPKAKLKQLP RKEISVLDHA TSSTTFSDRP QVEIPNSEDA TNPKTKNSQQ VSAKGHTVAL  60
VDDHLHSTIA ASDIDQIFTN FPRSASEAGP VDFEVGSGTN IIPQTNLNTE NELNNVTAPC  120
TTCSIIDGTQ EPPKNGEGSF LDSSKCLELV DNSLQVETDV GFKSDSDNKV AIFESNIQSK  180
SNFGREQEVV SAEFELDPFS NVLPDPGARN ARKFQPKIKP RPRVGNSAAN ASSSSNVMTE  240
KSVELPNSCM NEFQSNGDGS DRLNQSTSLP LPSQILRTTD LPNKPDYMSP SIPFSEDNTG  300
LAPVIPSQLD SLNAMLLEVA THNGTRDWPS SFGKSSGEAA DIFSGLESLD DFLTQAASDT  360
GKPALHSFNE KGTDENFVNH NCRSINSFGV CDTTQVQRCP MYQTTQDSIT FNEAAVLNED  420
DTHTNNRRLE TKYWFQEVVD LNPACPGDDV FEYQSMKSGT DPTSETPVHE ELTNAADSPT  480
LADFLHADVA REKDANERTK DGSISSSSRK NKRSSIIGEE DNDGNTSRQL RKQTAHKPTN  540
SSLNDDVEDD DNLDANGDEL EENGDDHEVD YSSKKGRAST SSKKKSGAKN GKTTQKRKRA  600
NDDLEKTIKE PPKKFSHSTQ RRKRTVDKAL LEIPEDELDP RTLPIKDIIL LAEYRERLAK  660
KEGTPQTTST YQSGGDFLHE ASANYEEEEI FGSEDGRDPD DDRANGRIPS ASSLFNYQSF  720
MEKAPRGKWS KQDTELFYEA VRQFGTDFSM IQQLFPDKTR HQIKLKYKKE ERQHPLRLSD  780
AVNNRAKDHS HFKLVIERLE LASTKAEDDP SRDASDFMMG EEVTDLTPGT NEEVATTEQG  840
ADVKAQEDSA AVHSPEQSDD SDDDFQKWAQ YKSAY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	583	599	KKKSGAKNGKTTQKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-45	MYB_related family protein