PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027359868.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 239aa    MW: 27801.7 Da    PI: 8.5839
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027359868.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF953.4e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr+g+lKKA+E+SvLCdaev +i+fs++gkl+ey++
  XP_027359868.1  9 KRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVGLIVFSHKGKLFEYAT 59
                    79***********************************************86 PP
2K-box107.12e-35751741100
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     y++++ + ++++++ +++ e+++Lk++++ Lqr++Rh++GedL s+slkeLq+LeqqL+++lk+iR+++n+l++e+i++lqkkek +qe+n++L 
  XP_027359868.1  75 YAERQLVGNDSETQGNWTIEYTRLKAKVDLLQRNHRHYMGEDLASMSLKELQSLEQQLDTALKNIRTRRNDLMYESISDLQKKEKVIQEQNNMLA 169
                     56677888889999********************************************************************************* PP

           K-box  96 kklee 100
                     kk++e
  XP_027359868.1 170 KKIKE 174
                     **987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRTGLLK KAHEISVLCD AEVGLIVFSH KGKLFEYATD  60
SCMEKILERH ERYAYAERQL VGNDSETQGN WTIEYTRLKA KVDLLQRNHR HYMGEDLASM  120
SLKELQSLEQ QLDTALKNIR TRRNDLMYES ISDLQKKEKV IQEQNNMLAK KIKEKEQAVA  180
QHAAQWEQPN YRVDTSFLPQ QPVPSLNIGG NYHQEAPELG RNELDLTLEP LYSCHLGCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.11e-108MIKC_MADS family protein