PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027359982.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 280aa    MW: 31382.3 Da    PI: 8.1351
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027359982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.89e-19135189256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq   Le+ F+++++++ ++++ LA++l+L  rqV vWFqNrRa+ k
  XP_027359982.1 135 RKKLRLTKEQSALLEDSFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTK 189
                     788899***********************************************98 PP
2HD-ZIP_I/II125.32.7e-40135224191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rl+keq++lLE+sF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l
  XP_027359982.1 135 RKKLRLTKEQSALLEDSFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELK-AL 224
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MGLDQDDNNS GLQLVLGLSL TVSSPPSTKA DDQLCLKPTP TKPYNNSSNE PSLTLSLSGE  60
SNYLAKQVTR NNKVYCEDPL DLSRQTSPHS VVSSFSSGRM VKRERDFSCE EAEAEAEERL  120
SSRVSDEDED GSNARKKLRL TKEQSALLED SFKQHSTLNP KQKQALARQL NLRPRQVEVW  180
FQNRRARTKL KQTEVDCEFL KKCCETLTDE NRRLKKELQE LKALKLSQPL YMPMPAATLT  240
MCPSCERLGG VNDSGSNKSP FSMAPKTHFY NPFANPSAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1184192RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.11e-87HD-ZIP family protein