PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027360462.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 387aa MW: 41914.2 Da PI: 7.9304

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027360462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	133	2.8e-41	76	203	2	114
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s + XP_027360462.1 76 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrsty 170 789******************************************************************99987777777777555556666677 PP TCP 89 .............kaaksaakskksqksaasalnlakes 114 ++++++++++ ln++ + XP_027360462.1 171 fnpnfslqprrslF------LTSENTNNSTTLLNFQSNN 203 77777763333330......4444444444455554433 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MEGGDDFHHH HHHRQNFPFQ LLEKKEDQEA PSSCSTSSPY PSLAISAEPS STSNSTRSTN 60 NQLLPAPSEP SPKKPPPKRT STKDRHTKVD GRGRRIRMPA LCAARVFQLT RELGHKSDGE 120 TIEWLLQQAE PAVIAATGTG TIPANFTSLN ISLRSSGSSM SVPSQLRSTY FNPNFSLQPR 180 RSLFLTSENT NNSTTLLNFQ SNNPISTGMF QAKHELRETT SLDLSSENTE EGLGRKRRPA 240 EQDLSTTTQH QVGSYFMQSS TSGTIPASHA QIPANIWMVA NSNSQGLSGE PPLWTFPGVS 300 NSALYRGTVS SGLHFMNFPT PMALLPSQQL GSSGIGGGGN MNEGHLSMLS GLNPYRTVIG 360 VSESQASGSQ SHHGGSEDRH DNTSHHS

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MEGGDDFHHH HHHRQNFPFQ LLEKKEDQEA PSSCSTSSPY PSLAISAEPS STSNSTRSTN  60
NQLLPAPSEP SPKKPPPKRT STKDRHTKVD GRGRRIRMPA LCAARVFQLT RELGHKSDGE  120
TIEWLLQQAE PAVIAATGTG TIPANFTSLN ISLRSSGSSM SVPSQLRSTY FNPNFSLQPR  180
RSLFLTSENT NNSTTLLNFQ SNNPISTGMF QAKHELRETT SLDLSSENTE EGLGRKRRPA  240
EQDLSTTTQH QVGSYFMQSS TSGTIPASHA QIPANIWMVA NSNSQGLSGE PPLWTFPGVS  300
NSALYRGTVS SGLHFMNFPT PMALLPSQQL GSSGIGGGGN MNEGHLSMLS GLNPYRTVIG  360
VSESQASGSQ SHHGGSEDRH DNTSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	1e-51	TCP family protein