PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027360642.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 25584 Da    PI: 6.6845
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027360642.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.61.6e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    +i+n + rqvtfskRr g++KKAeELSvLCda++a+iifsstgkl+eyss
  XP_027360642.1 10 KIDNATARQVTFSKRRRGLFKKAEELSVLCDADIALIIFSSTGKLFEYSS 59
                    69**********************************************96 PP
2K-box50.58.8e-18931712098
           K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     + ++L ke+ +  +++R+l GedL+ L+++eLqqLe+ Le++l ++ +kK e ++++i +lq+k   l een++L++ +
  XP_027360642.1  93 NCSRLSKEVAEKSHQLRQLRGEDLQGLNIEELQQLERSLETGLGRVIEKKGEKIMNEITDLQRKGMLLMEENERLKRHV 171
                     678899999999999************************************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MAREKIQIRK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADIALIIFSS TGKLFEYSSS  60
SMKEILERHH LHSKNLAKLE QPSLELQLVE NSNCSRLSKE VAEKSHQLRQ LRGEDLQGLN  120
IEELQQLERS LETGLGRVIE KKGEKIMNEI TDLQRKGMLL MEENERLKRH VTGTINGQRL  180
GGADSENLVM DEGQSSESVT NVCNSTGPPQ DYESSDTSLK LGLPYNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-119MIKC_MADS family protein