PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027360834.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 504aa MW: 55654.6 Da PI: 8.7174

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027360834.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.4e-17	152	201	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_027360834.1 152 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 201 78*****************......55**********************997 PP
2	AP2	43.8	6.3e-14	244	294	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_027360834.1 244 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 294 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MWDLNDSPDQ RKDYESEGCS SLKEGDDDKG KRVGSVSNSS SSAVVIEDGS EEEDGDRGGS 60 RTFKKKSSKI FGFSVTHHDS DRPPVTVTRQ FFPVEDSDVA LPSGGGGTSN SFPRAHWVGV 120 KFCQSETLGA GKSVEVSQPM KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG 180 GFDTAHAAAR AYDRAAIKFR GVEADINFNI EDYEDDLKQM SNLTKEEFVH VLRRQSTGFP 240 RGSSKYRGVT LHKCGRWEAR MGQFLGKKYV YLGLFDTEIE AARAYDKAAI KCNGKEAVTN 300 FDPSIYDKEL NSESSGVAAD HNLDLSLGNS SSKHSSSQAL GNQPPNSSTD QHMALESNWR 360 NGGSKPKVHL VNILPKPCGR SNMEAYARDG QGESEALRLL SQTRLHSPPT NEMHRYGPYR 420 SPAEPPQMPQ NFVNLHPPNF HVSSSSNGGR IGSDLSLSMS EQQWQPGPPH LLATAAASSG 480 FPPQIRPSQG WLQKNGFHTL MRPS

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MWDLNDSPDQ RKDYESEGCS SLKEGDDDKG KRVGSVSNSS SSAVVIEDGS EEEDGDRGGS  60
RTFKKKSSKI FGFSVTHHDS DRPPVTVTRQ FFPVEDSDVA LPSGGGGTSN SFPRAHWVGV  120
KFCQSETLGA GKSVEVSQPM KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG  180
GFDTAHAAAR AYDRAAIKFR GVEADINFNI EDYEDDLKQM SNLTKEEFVH VLRRQSTGFP  240
RGSSKYRGVT LHKCGRWEAR MGQFLGKKYV YLGLFDTEIE AARAYDKAAI KCNGKEAVTN  300
FDPSIYDKEL NSESSGVAAD HNLDLSLGNS SSKHSSSQAL GNQPPNSSTD QHMALESNWR  360
NGGSKPKVHL VNILPKPCGR SNMEAYARDG QGESEALRLL SQTRLHSPPT NEMHRYGPYR  420
SPAEPPQMPQ NFVNLHPPNF HVSSSSNGGR IGSDLSLSMS EQQWQPGPPH LLATAAASSG  480
FPPQIRPSQG WLQKNGFHTL MRPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-129	AP2 family protein