PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027361113.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 238aa MW: 25328.2 Da PI: 10.1468

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027361113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.6	3.6e-37	31	168	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as+++ ++++ + XP_027361113.1 31 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSDHKPLL-----Ppptpfilg 120 78**************************************************************99999666222222222.....123333444 PP TCP 89 ...............................................k 89 + XP_027361113.1 121 krirpdddaaakddavslvgsptphalwalpsrpdfgqvwsfaaaaaA 168 444455555555666666667777777777777777777777765431 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MSNSDGATNG VSSNGAIVES QRNSQQSNAL AVKKPPSKDR HSKVDGRGRR IRMPIICAAR 60 VFQLTRELGH KSDGQTIEWL LRQAEPSIIA ATGTGTTPAS FSTVSDHKPL LPPPTPFILG 120 KRIRPDDDAA AKDDAVSLVG SPTPHALWAL PSRPDFGQVW SFAAAAAAAA PPELVSVSTQ 180 QHGSMFHQHH HQQQQQQQAA MGEASAARLG NYLPGHLNLL ASLSGGHGNS GRRDDEPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	7e-72	TCP family protein